Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | C6B13_13960 | Not Available | Positive | 2780267 - 2781493 | 44544.2 |
| phosphotriesterase-related protein | C6B13_13965 | Not Available | Positive | 2781490 - 2782368 | 32804.3 |
| duf2620 domain-containing protein | C6B13_13970 | Not Available | Positive | 2782379 - 2782732 | 12479.5 |
| hypothetical protein | C6B13_13975 | Not Available | Positive | 2782744 - 2784048 | 46442.1 |
| aminotransferase class v-fold plp-dependent enzyme | C6B13_13980 | Not Available | Positive | 2784060 - 2785145 | 38624.7 |
| duf4223 domain-containing protein | C6B13_13985 | Not Available | Negative | 2785252 - 2785419 | 5819.16 |
| uroporphyrinogen-iii c-methyltransferase | C6B13_13990 | Not Available | Negative | 2785670 - 2787043 | 49953.5 |
| nitrite transporter nirc | C6B13_13995 | Not Available | Negative | 2787062 - 2787868 | 28578.2 |
| nitrite reductase small subunit | C6B13_14000 | Not Available | Negative | 2787993 - 2788319 | 12270.6 |
| nitrite reductase large subunit | C6B13_14005 | Not Available | Negative | 2788316 - 2790859 | 93112.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





