Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4049 domain-containing protein | C6B13_13400 | Not Available | Positive | 2659869 - 2661491 | 61112.8 |
| hypothetical protein | C6B13_13405 | Not Available | Positive | 2661857 - 2662924 | 38834.6 |
| multidrug abc transporter atp-binding protein | C6B13_13410 | Not Available | Positive | 2662921 - 2665647 | 100393.0 |
| inner membrane transport permease yhhj | C6B13_13415 | Not Available | Positive | 2665647 - 2666771 | 41050.2 |
| type ii toxin-antitoxin system hicb family antitoxin | C6B13_13425 | Not Available | Positive | 2667116 - 2667475 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | C6B13_13430 | Not Available | Negative | 2667595 - 2667996 | 15094.7 |
| abc transporter atp-binding protein | C6B13_13435 | Not Available | Negative | 2668001 - 2668807 | 29712.4 |
| abc transporter atp-binding protein | C6B13_13440 | Not Available | Negative | 2668804 - 2669568 | 26814.2 |
| nickel abc transporter permease subunit nikc | C6B13_13445 | Not Available | Negative | 2669568 - 2670401 | 30363.8 |
| nickel abc transporter permease subunit nikb | C6B13_13450 | Not Available | Negative | 2670398 - 2671342 | 35237.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





