Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme utilization cystosolic carrier protein hutx | C6B13_13245 | Not Available | Negative | 2630659 - 2631153 | 18275.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | C6B13_13250 | Not Available | Negative | 2631166 - 2632503 | 49622.2 |
| hemin abc transporter substrate-binding protein | C6B13_13255 | Not Available | Negative | 2632523 - 2633515 | 36101.8 |
| hypothetical protein | C6B13_13265 | Not Available | Negative | 2634024 - 2634215 | 7010.53 |
| tonb-dependent hemoglobin/transferrin/lactoferrin family receptor | C6B13_13270 | Not Available | Positive | 2634121 - 2636103 | 72491.0 |
| hemin-degrading factor | C6B13_13275 | Not Available | Positive | 2636152 - 2637180 | 38638.8 |
| helix-turn-helix transcriptional regulator | C6B13_13280 | Not Available | Negative | 2637241 - 2637771 | 20442.5 |
| dctr protein | C6B13_13285 | Not Available | Negative | 2637710 - 2637883 | 6504.17 |
| outer membrane protein slp | C6B13_13290 | Not Available | Negative | 2637924 - 2638490 | 20949.1 |
| hypothetical protein | C6B13_13295 | Not Available | Negative | 2638736 - 2639959 | 47459.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





