Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of ribonuclease activity b | C6B13_12060 | Not Available | Positive | 2390323 - 2390739 | 15603.5 |
| n-acetyltransferase | C6B13_12065 | Not Available | Negative | 2390785 - 2391288 | 18609.4 |
| duf898 domain-containing protein | C6B13_12070 | Not Available | Positive | 2391481 - 2392677 | 44901.2 |
| valine--trna ligase | C6B13_12075 | Not Available | Negative | 2392733 - 2395588 | 108170.0 |
| dna polymerase iii subunit chi | C6B13_12080 | Not Available | Negative | 2395588 - 2396031 | 16574.5 |
| cytosol aminopeptidase | C6B13_12085 | Not Available | Negative | 2396287 - 2397798 | 54883.1 |
| lps export abc transporter permease lptf | C6B13_12090 | Not Available | Positive | 2398065 - 2399165 | 40360.1 |
| lps export abc transporter permease lptg | C6B13_12095 | Not Available | Positive | 2399165 - 2400247 | 39621.0 |
| duf853 domain-containing protein | C6B13_12100 | Not Available | Negative | 2400408 - 2401910 | 54335.5 |
| transcriptional regulator | C6B13_12105 | Not Available | Negative | 2401988 - 2402986 | 37569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





