Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytfj family protein | C6B13_11860 | Not Available | Negative | 2350766 - 2351323 | 20617.9 |
| duf1107 domain-containing protein | C6B13_11865 | Not Available | Positive | 2351648 - 2351854 | 8072.24 |
| hlyc/corc family transporter | C6B13_11870 | Not Available | Negative | 2351915 - 2353258 | 49765.6 |
| peptide-methionine (s)-s-oxide reductase | C6B13_11875 | Not Available | Negative | 2353581 - 2354219 | 23335.3 |
| hypothetical protein | C6B13_11880 | Not Available | Positive | 2354276 - 2354455 | 6739.28 |
| autotransporter assembly complex protein tama | C6B13_11885 | Not Available | Positive | 2354425 - 2356158 | 64827.7 |
| autotransporter assembly complex protein tamb | C6B13_11890 | Not Available | Positive | 2356155 - 2359934 | 136700.0 |
| gamma-glutamylcyclotransferase ytfp | C6B13_11895 | Not Available | Positive | 2359937 - 2360278 | 12867.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | C6B13_11900 | Not Available | Positive | 2360490 - 2360741 | 9332.18 |
| type ii toxin-antitoxin system chpb family toxin | C6B13_11905 | Not Available | Positive | 2360735 - 2361085 | 12454.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





