Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(2457) synthase rlue | C6B13_08840 | Not Available | Negative | 1784543 - 1785181 | 24142.8 |
| duf1493 domain-containing protein | C6B13_08845 | Not Available | Negative | 1785514 - 1785849 | 13213.5 |
| hypothetical protein | C6B13_08850 | Not Available | Negative | 1785849 - 1786298 | 16822.5 |
| nadp-dependent isocitrate dehydrogenase | C6B13_08855 | Not Available | Positive | 1786878 - 1788128 | 45772.4 |
| anti-adapter protein iram | C6B13_08860 | Not Available | Negative | 1788231 - 1788554 | 12181.2 |
| duf1398 domain-containing protein | C6B13_08865 | Not Available | Negative | 1789257 - 1789661 | 15828.0 |
| helix-turn-helix-type transcriptional regulator | C6B13_08870 | Not Available | Negative | 1789882 - 1790613 | 28236.1 |
| diguanylate phosphodiesterase | C6B13_08875 | Not Available | Negative | 1790818 - 1792029 | 45301.6 |
| two-component-system connector protein ycgz | C6B13_08880 | Not Available | Positive | 1792343 - 1792579 | 8674.38 |
| two-component-system connector protein ymga | C6B13_08885 | Not Available | Positive | 1792622 - 1792894 | 10329.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





