Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1633856 - 1633943 | Not Available |
| hydrogenase-1 small chain | C6B13_08030 | Not Available | Positive | 1634369 - 1635487 | 40683.6 |
| hydrogenase-1 large chain | C6B13_08035 | Not Available | Positive | 1635484 - 1637277 | 66257.0 |
| ni/fe-hydrogenase, b-type cytochrome subunit | C6B13_08040 | Not Available | Positive | 1637296 - 1638003 | 27612.9 |
| hyad/hybd family hydrogenase maturation endopeptidase | C6B13_08045 | Not Available | Positive | 1638000 - 1638587 | 21587.8 |
| hydrogenase-1 operon protein hyae | C6B13_08050 | Not Available | Positive | 1638584 - 1638982 | 14904.6 |
| hydrogenase expression/formation protein | C6B13_08055 | Not Available | Positive | 1638979 - 1639836 | 31390.4 |
| cytochrome bd-ii ubiquinol oxidase subunit i | C6B13_08060 | Not Available | Positive | 1639970 - 1641514 | 58026.3 |
| cytochrome d ubiquinol oxidase subunit ii | C6B13_08065 | Not Available | Positive | 1641526 - 1642662 | 42428.4 |
| cytochrome bd-ii oxidase subunit cbdx | C6B13_08070 | Not Available | Positive | 1642675 - 1642767 | 3597.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





