Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase-activating protein | C6B13_07665 | Not Available | Negative | 1552907 - 1553647 | 28205.9 |
| formate acetyltransferase 1 | C6B13_07670 | Not Available | Negative | 1553839 - 1556121 | 85376.1 |
| formate transporter foca | C6B13_07675 | Not Available | Negative | 1556176 - 1557033 | 30992.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | C6B13_07680 | Not Available | Negative | 1557439 - 1559199 | 65669.0 |
| duf421 domain-containing protein | C6B13_07685 | Not Available | Positive | 1559329 - 1560021 | 26251.4 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C6B13_07690 | Not Available | Positive | 1560220 - 1561308 | 39884.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C6B13_07695 | Not Available | Positive | 1561379 - 1562662 | 46241.6 |
| metalloprotease | C6B13_07700 | Not Available | Positive | 1562831 - 1563595 | 26738.7 |
| cytidylate kinase | C6B13_07705 | Not Available | Positive | 1563768 - 1564451 | 24747.8 |
| 30s ribosomal protein s1 | C6B13_07710 | Not Available | Positive | 1564562 - 1566235 | 61161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





