Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | C6B13_05505 | Not Available | Negative | 1121001 - 1122665 | 59800.9 |
| homoprotocatechuate degradation operon regulator hpar | C6B13_05510 | Not Available | Negative | 1122784 - 1123284 | 19526.7 |
| 4-hydroxyphenylacetate degradation protein | C6B13_05515 | Not Available | Positive | 1123496 - 1124791 | 47342.3 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | C6B13_05520 | Not Available | Positive | 1124788 - 1126254 | 53044.7 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C6B13_05525 | Not Available | Positive | 1126256 - 1127107 | 32020.2 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | C6B13_05530 | Not Available | Positive | 1127117 - 1127497 | 14360.3 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | C6B13_05535 | Not Available | Positive | 1127565 - 1128368 | 29716.5 |
| 4-hydroxy-2-oxoheptanedioate aldolase | C6B13_05540 | Not Available | Positive | 1128379 - 1129167 | 28130.8 |
| 4-hydroxyphenylacetate permease | C6B13_05545 | Not Available | Positive | 1129342 - 1130718 | 50580.6 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | C6B13_05550 | Not Available | Positive | 1130728 - 1131618 | 34457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





