Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | C6B13_04885 | Not Available | Negative | 992933 - 993697 | 28213.8 |
| arabinose operon regulatory protein | C6B13_04890 | Not Available | Negative | 993783 - 994661 | 33385.8 |
| ribulokinase | C6B13_04900 | Not Available | Positive | 995000 - 996700 | 61273.8 |
| l-arabinose isomerase | C6B13_04905 | Not Available | Positive | 996711 - 998213 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | C6B13_04910 | Not Available | Positive | 998413 - 999108 | 25428.3 |
| dna polymerase ii | C6B13_04915 | Not Available | Positive | 999183 - 1001534 | 90098.7 |
| rna polymerase-associated protein rapa | C6B13_04920 | Not Available | Positive | 1001698 - 1004604 | 109762.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | C6B13_04925 | Not Available | Positive | 1004616 - 1005275 | 24862.1 |
| udp pyrophosphate phosphatase | C6B13_04935 | Not Available | Negative | 1005681 - 1006439 | 28187.2 |
| molecular chaperone djla | C6B13_04940 | Not Available | Negative | 1006734 - 1007549 | 30597.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





