Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain GER_MD14_1505_Eco_038 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1319978 bp
Thymine Count
1323505 bp
Guanine Count
1363372 bp
Cytosine Count
1329055 bp
Genome Length
5335910 bp
Protein-coding Genes
5105 genes
Non-Coding Genes
282 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leu operon leader peptide | C6B13_04830 | Not Available | Positive | 981585 - 981671 | 3146.0 |
| 2-isopropylmalate synthase | C6B13_04835 | Not Available | Positive | 981764 - 983335 | 57259.1 |
| 3-isopropylmalate dehydrogenase | C6B13_04840 | Not Available | Positive | 983335 - 984426 | 39530.3 |
| 3-isopropylmalate dehydratase large subunit | C6B13_04845 | Not Available | Positive | 984429 - 985829 | 49884.7 |
| 3-isopropylmalate dehydratase small subunit | C6B13_04850 | Not Available | Positive | 985840 - 986445 | 22558.7 |
| transcriptional regulator sgrr | C6B13_04860 | Not Available | Positive | 986772 - 988430 | 64155.9 |
| type iii effector | C6B13_04865 | Not Available | Negative | 988660 - 989229 | 21768.7 |
| thiamine abc transporter substrate binding subunit | C6B13_04870 | Not Available | Positive | 989600 - 990583 | 36205.2 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | C6B13_04875 | Not Available | Positive | 990559 - 992169 | 59410.6 |
| thiamine abc transporter atp-binding protein thiq | C6B13_04880 | Not Available | Positive | 992153 - 992851 | 24922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





