Escherichia coli strain GER_MD14_1505_Eco_038

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain GER_MD14_1505_Eco_038 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or singles. This strain thrives optimally at a temperature of 37.0°C, which is consistent with the human body temperature, suggesting its adaptation to a host-associated habitat. As a facultative anaerobe, GER_MD14_1505_Eco_038 possesses the metabolic flexibility to grow in both aerobic and anaerobic conditions, allowing it to colonize diverse niches within its host environment. The host-associated nature of this strain indicates a potential symbiotic relationship with the host, where it may play roles in nutrient metabolism or gut homeostasis, though the specific functions and interactions remain to be elucidated. Its ability to thrive in varying oxygen levels may facilitate its survival in different regions of the host, such as the intestines, where oxygen availability can fluctuate significantly. The unique traits of E. coli strain GER_MD14_1505_Eco_038 underscore its potential ecological significance within the microbiota, particularly in relation to its adaptability and resilience in fluctuating environmental conditions within a host. Further investigation is warranted to explore its specific interactions and contributions to host health and microbiome dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain GER_MD14_1505_Eco_038
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain GER_MD14_1505_Eco_038

Accession NumberPUSI00000000.1

Gene Summary

Adenine Count

1319978 bp

Thymine Count

1323505 bp

Guanine Count

1363372 bp

Cytosine Count

1329055 bp

Genome Length

5335910 bp

Protein-coding Genes

5105 genes

Non-Coding Genes

282 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinC6B13_01830Not Available-381266 - 3814185689.89
Hypothetical proteinC6B13_01835Not Available+381436 - 3816277462.05
succinate dehydrogenaseC6B13_01840Not Available+381689 - 3818356054.64
Putative outer membrane lipoproteinC6B13_01845Not Available+381938 - 38245617706.1
Hypothetical proteinC6B13_01850Not Available+382472 - 38301120279.5
AttlNot AvailableNot Available+383104 - 383120Not Available
Tail proteinC6B13_01855Not Available-383231 - 38371318108.3
Putative endolysinC6B13_01860Not Available-383710 - 38433922982.3
Putative holinC6B13_01865Not Available-384329 - 38463711437.3
Hypothetical proteinC6B13_01870Not Available-384624 - 38502814263.6

Displaying genes 1 – 10 of 5387 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites