Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | C5715_01930 | Not Available | Positive | 319657 - 319872 | 8500.42 |
| dna primase | C5715_01935 | Not Available | Positive | 319983 - 321728 | 65568.5 |
| rna polymerase subunit sigma | C5715_01940 | Not Available | Positive | 321742 - 321864 | 4564.46 |
| rna polymerase sigma factor rpod | C5715_01945 | Not Available | Positive | 321923 - 323764 | 70211.2 |
| is66 family transposase | C5715_01950 | Not Available | Negative | 323891 - 324740 | 31976.1 |
| hypothetical protein | C5715_01955 | Not Available | Positive | 324741 - 325171 | 15840.1 |
| duf987 domain-containing protein | C5715_01960 | Not Available | Positive | 325240 - 325461 | 8409.23 |
| antitoxin of toxin-antitoxin stability system | C5715_01965 | Not Available | Positive | 325480 - 326127 | 25137.2 |
| type iv toxin-antitoxin system yeeu family antitoxin | C5715_01970 | Not Available | Positive | 326177 - 326545 | 13800.4 |
| toxin | C5715_01975 | Not Available | Positive | 326634 - 327011 | 13910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





