Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein thiq | C5715_27290 | Not Available | Positive | 5102050 - 5102748 | 25041.7 |
| hypothetical protein | C5715_27295 | Not Available | Negative | 5102830 - 5103594 | 28145.7 |
| arabinose operon regulatory protein | C5715_27300 | Not Available | Negative | 5103680 - 5104558 | 33385.8 |
| ribulokinase | C5715_27310 | Not Available | Positive | 5104897 - 5106597 | 61157.7 |
| l-arabinose isomerase | C5715_27315 | Not Available | Positive | 5106608 - 5108110 | 56106.2 |
| l-ribulose-5-phosphate 4-epimerase | C5715_27320 | Not Available | Positive | 5108225 - 5108920 | 25513.4 |
| dna polymerase ii | C5715_27325 | Not Available | Positive | 5108995 - 5111346 | 89915.5 |
| rna polymerase-associated protein rapa | C5715_27330 | Not Available | Positive | 5111510 - 5114416 | 109786.0 |
| bifunctional trna pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase rlua | C5715_27335 | Not Available | Positive | 5114428 - 5115087 | 24862.1 |
| udp pyrophosphate phosphatase | C5715_27345 | Not Available | Negative | 5115495 - 5116256 | 28427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





