Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gsph | C5715_25555 | Not Available | Positive | 4764572 - 4765081 | 18512.0 |
| type ii secretion system protein gspi | C5715_25560 | Not Available | Positive | 4765078 - 4765455 | 13902.2 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | C5715_25565 | Not Available | Positive | 4765448 - 4766035 | 22327.6 |
| general secretion pathway protein gspk | C5715_25570 | Not Available | Positive | 4766028 - 4767011 | 37575.6 |
| type ii secretion system protein gspl | C5715_25575 | Not Available | Positive | 4767026 - 4768189 | 44561.3 |
| type ii secretion system protein m | C5715_25580 | Not Available | Positive | 4768186 - 4768647 | 17181.7 |
| prepilin peptidase | C5715_25585 | Not Available | Positive | 4768647 - 4769324 | 24761.0 |
| bacterioferritin | C5715_25590 | Not Available | Negative | 4769353 - 4769829 | 18526.2 |
| bacterioferritin-associated ferredoxin | C5715_25595 | Not Available | Negative | 4769901 - 4770095 | 7363.04 |
| lysozyme | C5715_25600 | Not Available | Negative | 4770264 - 4772966 | 97391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





