Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5715_30535 | Not Available | Negative | 5601658 - 5601939 | 10599.7 |
| Putative endolysin | C5715_30540 | Not Available | Negative | 5602010 - 5602387 | 14033.7 |
| Putative holin | C5715_30545 | Not Available | Negative | 5602390 - 5602665 | 10532.5 |
| Putative holin | C5715_30550 | Not Available | Negative | 5602655 - 5603047 | 13187.2 |
| Hypothetical protein | C5715_30555 | Not Available | Positive | 5603218 - 5603415 | 7657.34 |
| Shiga toxin 2e b-subunit | C5715_30560 | Not Available | Negative | 5603466 - 5603729 | 9650.67 |
| Shiga toxin 2e a-subunit | C5715_30565 | Not Available | Negative | 5603742 - 5604701 | 35572.4 |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 5604792 - 5604868 | Not Available |
| Trna,type:undet,anti_codon:???; | Not Available | Not Available | Positive | 5604882 - 5604962 | Not Available |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 5604970 - 5605045 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





