Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | C5715_24885 | Not Available | Positive | 4648178 - 4649527 | 48680.1 |
| hypothetical protein | C5715_24890 | Not Available | Positive | 4649527 - 4650363 | 32632.4 |
| ytfj family protein | C5715_24895 | Not Available | Positive | 4650363 - 4650923 | 20687.9 |
| lps export abc transporter permease lptf | C5715_24900 | Not Available | Positive | 4650954 - 4652024 | 39975.3 |
| lps export abc transporter permease lptg | C5715_24905 | Not Available | Positive | 4652021 - 4653100 | 39721.3 |
| aminotransferase class v-fold plp-dependent enzyme | C5715_24910 | Not Available | Negative | 4653135 - 4654307 | 41727.1 |
| acyl carrier protein | C5715_24915 | Not Available | Negative | 4654307 - 4654555 | 9407.65 |
| short-chain dehydrogenase | C5715_24920 | Not Available | Negative | 4654587 - 4655501 | 33574.3 |
| fatty acyl-amp ligase | C5715_24925 | Not Available | Negative | 4655498 - 4657231 | 63639.1 |
| n-acetyltransferase | C5715_24930 | Not Available | Positive | 4657594 - 4658736 | 43451.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





