Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | C5715_24150 | Not Available | Positive | 4502974 - 4503080 | 3934.66 |
| glutamate:gamma-aminobutyrate antiporter | C5715_24155 | Not Available | Positive | 4503236 - 4504771 | 55035.9 |
| glycoside hydrolase family 10 protein | C5715_24160 | Not Available | Positive | 4504902 - 4506221 | 49646.9 |
| diguanylate cyclase | C5715_24165 | Not Available | Positive | 4506598 - 4507980 | 53172.7 |
| oxygen-sensing cyclic-di-gmp phosphodiesterase | C5715_24170 | Not Available | Positive | 4507981 - 4510404 | 91210.7 |
| d-alanyl-d-alanine dipeptidase | C5715_24175 | Not Available | Positive | 4510662 - 4511243 | 21202.2 |
| abc transporter substrate-binding protein | C5715_24180 | Not Available | Positive | 4511257 - 4512807 | 57654.2 |
| abc transporter permease | C5715_24185 | Not Available | Positive | 4512809 - 4513831 | 37398.4 |
| d-ala-d-ala transporter subunit | C5715_24190 | Not Available | Positive | 4513828 - 4514724 | 31990.9 |
| abc transporter atp-binding protein | C5715_24195 | Not Available | Positive | 4514721 - 4515707 | 36076.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





