Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5715_23855 | Not Available | Negative | 4464352 - 4464822 | 17458.6 |
| hypothetical protein | C5715_23860 | Not Available | Negative | 4464881 - 4465909 | 36652.0 |
| hypothetical protein | C5715_23865 | Not Available | Negative | 4465924 - 4466541 | 21696.9 |
| duf2213 domain-containing protein | C5715_23870 | Not Available | Negative | 4466534 - 4467856 | 48385.6 |
| hypothetical protein | C5715_23875 | Not Available | Negative | 4467837 - 4468556 | 27735.2 |
| duf1073 domain-containing protein | C5715_23880 | Not Available | Negative | 4468615 - 4470051 | 53576.0 |
| trna 2-thiocytidine(32) synthetase ttca | C5715_24080 | Not Available | Positive | 4494370 - 4495305 | 35502.9 |
| atp-dependent rna helicase dbpa | C5715_24085 | Not Available | Negative | 4495434 - 4496807 | 49256.8 |
| hypothetical protein | C5715_24090 | Not Available | Negative | 4496837 - 4497010 | 6427.87 |
| hypothetical protein | C5715_24095 | Not Available | Positive | 4497207 - 4497578 | 13648.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





