Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | C5715_22475 | Not Available | Negative | 4207211 - 4209289 | 78400.5 |
| hydrogenase expression/formation protein hype | C5715_22480 | Not Available | Negative | 4209363 - 4210373 | 35096.6 |
| hydrogenase formation protein hypd | C5715_22485 | Not Available | Negative | 4210370 - 4211491 | 41419.8 |
| hydrogenase assembly protein hypc | C5715_22490 | Not Available | Negative | 4211491 - 4211763 | 9732.58 |
| hydrogenase isoenzymes nickel incorporation protein hypb | C5715_22495 | Not Available | Negative | 4211754 - 4212626 | 31566.8 |
| protein hypa | C5715_22500 | Not Available | Negative | 4212630 - 4212980 | 13168.9 |
| formate hydrogenlyase regulatory protein hyca | C5715_22505 | Not Available | Positive | 4213192 - 4213653 | 17627.9 |
| formate hydrogenlyase subunit 2 | C5715_22510 | Not Available | Positive | 4213778 - 4214389 | 21874.4 |
| formate hydrogenlyase subunit 3 | C5715_22515 | Not Available | Positive | 4214386 - 4216212 | 64127.2 |
| hydrogenase 3 membrane subunit | C5715_22520 | Not Available | Positive | 4216215 - 4217138 | 33059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





