Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | C5715_21435 | Not Available | Positive | 4017636 - 4019174 | 57145.2 |
| glutamate/aspartate abc transporter substrate-binding protein | C5715_21440 | Not Available | Positive | 4019571 - 4020479 | 33392.9 |
| glutamate abc transporter permease | C5715_21445 | Not Available | Positive | 4020649 - 4021389 | 27504.3 |
| glutamate abc transporter permease | C5715_21450 | Not Available | Positive | 4021389 - 4022063 | 24916.2 |
| glutamate/aspartate transport atp-binding protein gltl | C5715_21455 | Not Available | Positive | 4022063 - 4022788 | 26662.7 |
| pyrimidine-specific ribonucleoside hydrolase riha | C5715_21460 | Not Available | Positive | 4022906 - 4023841 | 33824.9 |
| hypothetical protein | C5715_21465 | Not Available | Negative | 4023886 - 4024368 | 18798.2 |
| leucine--trna ligase | C5715_21470 | Not Available | Positive | 4024603 - 4027185 | 97285.0 |
| lps assembly lipoprotein lpte | C5715_21475 | Not Available | Positive | 4027200 - 4027781 | 21356.8 |
| dna polymerase iii subunit delta | C5715_21480 | Not Available | Positive | 4027781 - 4028812 | 38726.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





