Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-associated protein | C5715_20300 | Not Available | Negative | 3810966 - 3811517 | 21360.5 |
| metalloprotease pmba | C5715_20305 | Not Available | Positive | 3811611 - 3812963 | 48372.4 |
| cytochrome b562 | C5715_20310 | Not Available | Positive | 3813146 - 3813532 | 13989.7 |
| type ii toxin-antitoxin system antitoxin, relb/dinj family | C5715_20320 | Not Available | Positive | 3813724 - 3813966 | 9084.01 |
| type ii toxin-antitoxin system rele/pare family toxin | C5715_20325 | Not Available | Positive | 3813956 - 3814246 | 11367.8 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | C5715_20330 | Not Available | Negative | 3814247 - 3814711 | 17430.9 |
| anaerobic ribonucleoside triphosphate reductase | C5715_20335 | Not Available | Negative | 3814896 - 3817034 | 80043.0 |
| alpha,alpha-phosphotrehalase | C5715_20340 | Not Available | Negative | 3817428 - 3819083 | 63807.0 |
| pts trehalose transporter subunit iibc | C5715_20345 | Not Available | Negative | 3819133 - 3820554 | 51109.0 |
| trehalose operon repressor | C5715_20350 | Not Available | Negative | 3820673 - 3821620 | 34575.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





