Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | C5715_19255 | Not Available | Positive | 3635342 - 3636829 | 56619.2 |
| hypothetical protein | C5715_19260 | Not Available | Negative | 3636863 - 3637276 | 15002.1 |
| yeee/yede family protein | C5715_19270 | Not Available | Positive | 3637463 - 3638668 | 44402.5 |
| sira-like protein | C5715_19275 | Not Available | Positive | 3638665 - 3638898 | 8639.5 |
| sos response-associated peptidase | C5715_19280 | Not Available | Positive | 3639005 - 3639673 | 24996.5 |
| gnat family n-acetyltransferase | C5715_19285 | Not Available | Positive | 3639784 - 3640263 | 17901.5 |
| integrase | C5715_19290 | Not Available | Positive | 3640470 - 3640748 | 10932.2 |
| flagellar hook-basal body complex protein flie | C5715_19295 | Not Available | Negative | 3640668 - 3640982 | 11136.5 |
| flagellar basal body m-ring protein flif | C5715_19300 | Not Available | Positive | 3641197 - 3642855 | 60610.7 |
| flagellar motor switch protein flig | C5715_19305 | Not Available | Positive | 3642848 - 3643843 | 36778.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





