Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | C5715_18525 | Not Available | Negative | 3515838 - 3516812 | 35948.3 |
| elongation factor 4 | C5715_18530 | Not Available | Negative | 3516828 - 3518627 | 66574.1 |
| soxr reducing system protein rsec | C5715_18535 | Not Available | Negative | 3518825 - 3519304 | 16629.3 |
| sigma-e factor regulatory protein rseb | C5715_18540 | Not Available | Negative | 3519301 - 3520257 | 35765.8 |
| anti-sigma-e factor rsea | C5715_18545 | Not Available | Negative | 3520257 - 3520907 | 24322.8 |
| ecf rna polymerase sigma-e factor | C5715_18550 | Not Available | Negative | 3520940 - 3521515 | 21697.0 |
| l-aspartate oxidase | C5715_18555 | Not Available | Positive | 3521923 - 3523545 | 60150.6 |
| trna (adenosine(37)-n6)-methyltransferase trmm | C5715_18560 | Not Available | Negative | 3523530 - 3524267 | 27271.4 |
| atp-dependent rna helicase srmb | C5715_18565 | Not Available | Positive | 3524399 - 3525733 | 49901.0 |
| lysr family transcriptional regulator | C5715_18570 | Not Available | Negative | 3525766 - 3526647 | 33312.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





