Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb | C5715_18210 | Not Available | Negative | 3449078 - 3450256 | 41887.6 |
| ancillary secyeg translocon subunit | C5715_18215 | Not Available | Negative | 3450267 - 3450887 | 22177.2 |
| histidine--trna ligase | C5715_18220 | Not Available | Negative | 3450905 - 3452179 | 47060.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | C5715_18225 | Not Available | Negative | 3452290 - 3453408 | 40686.1 |
| cytoskeleton protein rodz | C5715_18230 | Not Available | Negative | 3453435 - 3454448 | 36204.6 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | C5715_18240 | Not Available | Negative | 3454733 - 3455887 | 43088.0 |
| nucleoside-diphosphate kinase | C5715_18245 | Not Available | Negative | 3456037 - 3456468 | 15437.3 |
| penicillin-binding protein 1c | C5715_18250 | Not Available | Negative | 3456617 - 3458929 | 85003.8 |
| alpha-2-macroglobulin family protein | C5715_18255 | Not Available | Negative | 3458930 - 3463891 | 181480.0 |
| 3-mercaptopyruvate sulfurtransferase | C5715_18260 | Not Available | Positive | 3464098 - 3464943 | 30891.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





