Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | C5715_18005 | Not Available | Positive | 3396571 - 3397041 | 17634.9 |
| 4fe-4s dicluster domain-containing protein | C5715_18010 | Not Available | Positive | 3397294 - 3397911 | 22157.6 |
| hydrogenase 4 subunit b | C5715_18015 | Not Available | Positive | 3397911 - 3399929 | 72782.6 |
| hydrogenase 3 membrane subunit | C5715_18020 | Not Available | Positive | 3399940 - 3400887 | 34396.3 |
| hydrogenase-4 component d | C5715_18025 | Not Available | Positive | 3400904 - 3402343 | 51757.7 |
| hydrogenase 4 membrane subunit | C5715_18030 | Not Available | Positive | 3402355 - 3403005 | 23403.1 |
| hydrogenase 4 subunit f | C5715_18035 | Not Available | Positive | 3403010 - 3404590 | 56553.3 |
| hydrogenase large subunit | C5715_18040 | Not Available | Positive | 3404580 - 3406295 | 65037.1 |
| hydrogenase 4 subunit h | C5715_18045 | Not Available | Positive | 3406305 - 3406850 | 20158.4 |
| nadh-quinone oxidoreductase subunit nuob | C5715_18050 | Not Available | Positive | 3406847 - 3407605 | 28118.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





