Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsc family reductase | C5715_17955 | Not Available | Positive | 3387369 - 3387725 | 13587.3 |
| succinyl-diaminopimelate desuccinylase | C5715_17960 | Not Available | Positive | 3387729 - 3388856 | 41271.4 |
| hypothetical protein | C5715_17965 | Not Available | Positive | 3388884 - 3389084 | 8071.78 |
| esterase | C5715_17970 | Not Available | Negative | 3389165 - 3389863 | 24859.4 |
| trna(met) cytidine acetyltransferase | C5715_17975 | Not Available | Negative | 3389937 - 3391952 | 74788.7 |
| neutral zinc metallopeptidase | C5715_17980 | Not Available | Negative | 3391967 - 3392830 | 31462.0 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C5715_17985 | Not Available | Negative | 3392998 - 3393711 | 26996.5 |
| outer membrane protein assembly factor bamc | C5715_17990 | Not Available | Negative | 3393924 - 3394958 | 36848.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C5715_17995 | Not Available | Negative | 3394975 - 3395853 | 31253.8 |
| glycine cleavage system transcriptional repressor | C5715_18000 | Not Available | Positive | 3395999 - 3396571 | 20785.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





