Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease | C5715_17755 | Not Available | Negative | 3344065 - 3344940 | 32539.6 |
| sulfate abc transporter permease | C5715_17760 | Not Available | Negative | 3344940 - 3345773 | 30293.6 |
| sulfate abc transporter substrate-binding protein | C5715_17765 | Not Available | Negative | 3345773 - 3346789 | 37629.6 |
| nad(p)-dependent oxidoreductase | C5715_17770 | Not Available | Negative | 3346960 - 3347751 | 27865.7 |
| murr/rpir family transcriptional regulator | C5715_17775 | Not Available | Negative | 3347880 - 3348737 | 31399.8 |
| n-acetylmuramic acid 6-phosphate etherase | C5715_17780 | Not Available | Positive | 3348909 - 3349805 | 31042.7 |
| pts n-acetylmuramic acid transporter subunits iibc | C5715_17785 | Not Available | Positive | 3349809 - 3351233 | 49813.1 |
| penicillin binding protein pbp4b | C5715_17790 | Not Available | Positive | 3351238 - 3352539 | 47496.8 |
| deferrochelatase/peroxidase | C5715_17795 | Not Available | Negative | 3352597 - 3353496 | 33072.1 |
| rpoe-regulated lipoprotein | C5715_17800 | Not Available | Negative | 3353592 - 3354167 | 20829.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





