Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glycosyl transferase/transpeptidase | C5715_17450 | Not Available | Negative | 3291772 - 3294303 | 94168.9 |
| atp-dependent helicase hrpb | C5715_17455 | Not Available | Negative | 3294397 - 3296826 | 89120.1 |
| rna 2',3'-cyclic phosphodiesterase | C5715_17460 | Not Available | Positive | 3296900 - 3297430 | 19951.0 |
| dna/rna nuclease sfsa | C5715_17465 | Not Available | Positive | 3297445 - 3298149 | 26256.3 |
| rna polymerase-binding transcription factor dksa | C5715_17470 | Not Available | Positive | 3298327 - 3298782 | 17528.7 |
| trna glutamyl-q(34) synthetase gluqrs | C5715_17475 | Not Available | Positive | 3298819 - 3299745 | 34906.4 |
| polynucleotide adenylyltransferase | C5715_17480 | Not Available | Positive | 3299784 - 3301202 | 54659.0 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | C5715_17485 | Not Available | Positive | 3301199 - 3301678 | 17917.7 |
| fimbrial protein | C5715_17490 | Not Available | Positive | 3302026 - 3302598 | 19609.1 |
| fimbrial chaperone | C5715_17495 | Not Available | Positive | 3302691 - 3303422 | 26240.5 |
Pathways
1359 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





