Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription/translation regulatory transformer protein rfah | C5715_17135 | Not Available | Negative | 3225451 - 3225939 | 18341.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | C5715_17140 | Not Available | Positive | 3226106 - 3227599 | 55641.9 |
| nad(p)h-flavin reductase | C5715_17145 | Not Available | Positive | 3227645 - 3228346 | 26227.4 |
| acetyl-coa c-acyltransferase fada | C5715_17150 | Not Available | Negative | 3228537 - 3229700 | 40894.7 |
| fatty acid oxidation complex subunit alpha fadb | C5715_17155 | Not Available | Negative | 3229710 - 3231899 | 79570.4 |
| xaa-pro dipeptidase | C5715_17160 | Not Available | Positive | 3232089 - 3233420 | 50136.8 |
| yigz family protein | C5715_17165 | Not Available | Positive | 3233420 - 3234034 | 21708.1 |
| trk system potassium uptake protein trkh | C5715_17170 | Not Available | Positive | 3234073 - 3235524 | 52962.9 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | C5715_17175 | Not Available | Positive | 3235536 - 3236081 | 21200.4 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | C5715_17185 | Not Available | Negative | 3236676 - 3237248 | 21125.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





