Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | C5715_17085 | Not Available | Positive | 3217549 - 3218310 | 27151.7 |
| hypothetical protein | C5715_17090 | Not Available | Negative | 3218210 - 3218467 | 9450.18 |
| dna recombination protein rmuc | C5715_17095 | Not Available | Positive | 3218451 - 3219878 | 54738.7 |
| ubiquinone/menaquinone biosynthesis c-methyltransferase ubie | C5715_17100 | Not Available | Positive | 3219973 - 3220728 | 28074.8 |
| scp2 domain-containing protein | C5715_17105 | Not Available | Positive | 3220742 - 3221347 | 22123.8 |
| ubiquinone biosynthesis protein ubib | C5715_17110 | Not Available | Positive | 3221344 - 3222984 | 63190.3 |
| twin-arginine translocase subunit tata | C5715_17115 | Not Available | Positive | 3223063 - 3223332 | 9664.5 |
| twin-arginine translocase subunit tatb | C5715_17120 | Not Available | Positive | 3223336 - 3223851 | 18421.8 |
| twin-arginine translocase subunit tatc | C5715_17125 | Not Available | Positive | 3223854 - 3224630 | 28877.9 |
| 3'-5' ssdna/rna exonuclease tatd | C5715_17130 | Not Available | Positive | 3224672 - 3225454 | 28968.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





