Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase cytochrome b556 subunit | C5715_16355 | Not Available | Negative | 3075012 - 3075401 | 14300.0 |
| hypothetical protein | C5715_16360 | Not Available | Negative | 3075937 - 3076122 | 6817.23 |
| type ii citrate synthase | C5715_16365 | Not Available | Positive | 3076110 - 3077393 | 48017.7 |
| type 1 fimbrial protein | C5715_16370 | Not Available | Positive | 3077783 - 3078349 | 19882.1 |
| fimbrial biogenesis outer membrane usher protein | C5715_16375 | Not Available | Positive | 3078409 - 3080859 | 90168.3 |
| molecular chaperone | C5715_16380 | Not Available | Positive | 3080875 - 3081606 | 27224.0 |
| hypothetical protein | C5715_16385 | Not Available | Positive | 3081603 - 3082664 | 39671.8 |
| abrb family transcriptional regulator | C5715_16390 | Not Available | Positive | 3082817 - 3083863 | 36897.1 |
| endonuclease viii | C5715_16395 | Not Available | Negative | 3083860 - 3084651 | 29728.7 |
| lamb/ycsf family protein | C5715_16400 | Not Available | Negative | 3084687 - 3085421 | 25936.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





