Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | C5715_16305 | Not Available | Positive | 3062184 - 3062786 | 22387.7 |
| lysr family transcriptional regulator | C5715_16310 | Not Available | Negative | 3062820 - 3063725 | 34393.4 |
| rtcb family protein | C5715_16315 | Not Available | Positive | 3064315 - 3065712 | 51071.2 |
| succinyl-coa ligase subunit alpha | C5715_16320 | Not Available | Negative | 3065810 - 3066679 | 29779.3 |
| succinyl-coa ligase subunit beta | C5715_16325 | Not Available | Negative | 3066679 - 3067845 | 41395.1 |
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex | C5715_16330 | Not Available | Negative | 3067939 - 3069156 | 44014.0 |
| 2-oxoglutarate dehydrogenase subunit e1 | C5715_16335 | Not Available | Negative | 3069171 - 3071972 | 105068.0 |
| succinate dehydrogenase iron-sulfur subunit | C5715_16340 | Not Available | Negative | 3072173 - 3072889 | 26785.4 |
| succinate dehydrogenase flavoprotein subunit | C5715_16345 | Not Available | Negative | 3072905 - 3074671 | 64425.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | C5715_16350 | Not Available | Negative | 3074671 - 3075018 | 12868.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





