Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | C5715_15790 | Not Available | Positive | 2957657 - 2958016 | 13403.0 |
| nickel-responsive transcriptional regulator nikr | C5715_15795 | Not Available | Negative | 2958136 - 2958537 | 15094.7 |
| nickel import atp-binding protein nike | C5715_15800 | Not Available | Negative | 2958543 - 2959349 | 29771.5 |
| abc transporter atp-binding protein | C5715_15805 | Not Available | Negative | 2959346 - 2960110 | 26814.2 |
| nickel abc transporter permease subunit nikc | C5715_15810 | Not Available | Negative | 2960110 - 2960943 | 30363.8 |
| nickel abc transporter permease subunit nikb | C5715_15815 | Not Available | Negative | 2960940 - 2961884 | 35250.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | C5715_15820 | Not Available | Negative | 2961884 - 2963458 | 58777.2 |
| 4'-phosphopantetheinyl transferase acpt | C5715_15825 | Not Available | Negative | 2963569 - 2964156 | 21701.8 |
| mfs transporter | C5715_15835 | Not Available | Positive | 2965392 - 2966609 | 42184.3 |
| duf1795 domain-containing protein | C5715_15840 | Not Available | Negative | 2966613 - 2967170 | 19772.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





