Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | C5715_15740 | Not Available | Negative | 2943866 - 2945365 | 53420.4 |
| nad(p)/fad-dependent oxidoreductase | C5715_15745 | Not Available | Positive | 2945597 - 2946799 | 43757.6 |
| duf2776 domain-containing protein | C5715_15750 | Not Available | Negative | 2947115 - 2948167 | 37593.2 |
| hypothetical protein | C5715_15755 | Not Available | Positive | 2948360 - 2948575 | 8474.7 |
| duf4049 domain-containing protein | C5715_15760 | Not Available | Positive | 2948466 - 2950139 | 64144.4 |
| duf4049 domain-containing protein | C5715_15765 | Not Available | Positive | 2950401 - 2952023 | 61254.0 |
| hypothetical protein | C5715_15770 | Not Available | Positive | 2952389 - 2953456 | 38830.6 |
| abc transporter atp-binding protein/permease | C5715_15775 | Not Available | Positive | 2953453 - 2956188 | 100793.0 |
| inner membrane transport permease yhhj | C5715_15780 | Not Available | Positive | 2956188 - 2957312 | 41050.2 |
| type ii toxin-antitoxin system hica family toxin | C5715_15785 | Not Available | Positive | 2957385 - 2957660 | 10186.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





