Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | C5715_15295 | Not Available | Negative | 2871717 - 2873672 | 73167.9 |
| selenide, water dikinase seld | C5715_15300 | Not Available | Negative | 2873677 - 2874720 | 36659.4 |
| hypothetical protein | C5715_15305 | Not Available | Negative | 2874662 - 2874811 | 5567.61 |
| nad(p)h nitroreductase | C5715_15310 | Not Available | Negative | 2874837 - 2875388 | 20088.2 |
| hypothetical protein | C5715_15315 | Not Available | Positive | 2875442 - 2875606 | 5836.02 |
| signal peptide peptidase a | C5715_15320 | Not Available | Positive | 2875549 - 2877405 | 67263.0 |
| l-asparaginase 1 | C5715_15325 | Not Available | Positive | 2877571 - 2878587 | 37157.5 |
| bifunctional nicotinamidase/pyrazinamidase | C5715_15330 | Not Available | Positive | 2878598 - 2879239 | 23440.4 |
| is1 family transposase | C5715_15340 | Not Available | Negative | 2879785 - 2879977 | 7672.36 |
| heat-stable enterotoxin ii | C5715_15355 | Not Available | Negative | 2881760 - 2881975 | 7619.33 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





