Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | C5715_14635 | Not Available | Negative | 2744070 - 2745344 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | C5715_14640 | Not Available | Negative | 2745473 - 2746129 | 25576.6 |
| lysozyme inhibitor | C5715_14645 | Not Available | Negative | 2746188 - 2746517 | 12558.2 |
| anhydro-n-acetylmuramic acid kinase | C5715_14650 | Not Available | Negative | 2746615 - 2747724 | 39542.8 |
| outer membrane lipoprotein slyb | C5715_14655 | Not Available | Positive | 2747998 - 2748465 | 15602.7 |
| slya family transcriptional regulator | C5715_14660 | Not Available | Negative | 2748511 - 2748945 | 16381.1 |
| duf1656 domain-containing protein | C5715_14665 | Not Available | Positive | 2749146 - 2749382 | 8891.33 |
| hlyd family secretion protein | C5715_14670 | Not Available | Positive | 2749385 - 2750242 | 31536.6 |
| fusc family protein | C5715_14675 | Not Available | Positive | 2750242 - 2752254 | 75271.0 |
| superoxide dismutase | C5715_14680 | Not Available | Negative | 2752255 - 2752776 | 17681.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





