Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5715_14330 | Not Available | Positive | 2684218 - 2684559 | 12943.4 |
| spermidine n1-acetyltransferase | C5715_14335 | Not Available | Positive | 2684594 - 2685154 | 21902.3 |
| ynfc family lipoprotein | C5715_14340 | Not Available | Negative | 2685157 - 2685867 | 26522.3 |
| duf1161 domain-containing protein | C5715_14345 | Not Available | Positive | 2685975 - 2686280 | 10491.3 |
| dimethyl sulfoxide reductase subunit a | C5715_14350 | Not Available | Positive | 2686479 - 2688905 | 89705.8 |
| dimethyl sulfoxide reductase subunit a | C5715_14355 | Not Available | Positive | 2688966 - 2691389 | 89995.0 |
| dimethylsulfoxide reductase, chain b | C5715_14360 | Not Available | Positive | 2691400 - 2691996 | 21908.1 |
| dimethyl sulfoxide reductase anchor subunit | C5715_14365 | Not Available | Positive | 2691998 - 2692852 | 30491.5 |
| tat proofreading chaperone dmsd | C5715_14370 | Not Available | Positive | 2692895 - 2693509 | 23387.9 |
| voltage-gated clc-type chloride channel clcb | C5715_14375 | Not Available | Positive | 2693667 - 2694959 | 45779.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





