Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4942 domain-containing protein | C5715_14275 | Not Available | Negative | 2677371 - 2678219 | 32850.5 |
| duf957 domain-containing protein | C5715_14280 | Not Available | Negative | 2678304 - 2678501 | 7506.99 |
| toxin | C5715_14290 | Not Available | Negative | 2678723 - 2678955 | 8459.14 |
| autotransporter adhesin ag43 | C5715_14295 | Not Available | Negative | 2678956 - 2680153 | 39861.0 |
| site-specific integrase | C5715_14300 | Not Available | Positive | 2680342 - 2681118 | 29473.4 |
| transporter | C5715_14305 | Not Available | Negative | 2681120 - 2681248 | 4863.84 |
| zn-dependent oxidoreductase | C5715_14310 | Not Available | Negative | 2681306 - 2682325 | 36564.3 |
| starvation-sensing protein rspa | C5715_14315 | Not Available | Negative | 2682337 - 2683551 | 45971.0 |
| hypothetical protein | C5715_14320 | Not Available | Negative | 2683532 - 2683720 | 7304.78 |
| ynfa family protein | C5715_14325 | Not Available | Negative | 2683757 - 2684083 | 11906.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





