Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5715_13980 | Not Available | Positive | 2618236 - 2619168 | 34874.9 |
| c-di-gmp phosphodiesterase | C5715_13985 | Not Available | Negative | 2619210 - 2620298 | 40632.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | C5715_13990 | Not Available | Negative | 2620440 - 2624423 | 140912.0 |
| high-affinity choline transporter bett | C5715_13995 | Not Available | Negative | 2624997 - 2627030 | 75856.5 |
| hypothetical protein | C5715_14000 | Not Available | Negative | 2627027 - 2627242 | 8117.77 |
| transcriptional regulator | C5715_14005 | Not Available | Positive | 2627159 - 2627746 | 21843.4 |
| betaine-aldehyde dehydrogenase | C5715_14010 | Not Available | Positive | 2627760 - 2629232 | 53011.3 |
| choline dehydrogenase | C5715_14015 | Not Available | Positive | 2629246 - 2630934 | 62563.0 |
| hypothetical protein | C5715_14020 | Not Available | Negative | 2630959 - 2631186 | 8307.21 |
| dna recombinase | C5715_14030 | Not Available | Positive | 2631999 - 2632562 | 21803.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





