Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 abc transporter substrate-binding protein | C5715_13930 | Not Available | Negative | 2608486 - 2609472 | 35730.3 |
| asch domain-containing protein | C5715_13935 | Not Available | Negative | 2609723 - 2610163 | 16446.7 |
| deaminase | C5715_13940 | Not Available | Negative | 2610431 - 2611813 | 50531.5 |
| carbamate kinase | C5715_13945 | Not Available | Negative | 2611823 - 2612773 | 33947.8 |
| duf1116 domain-containing protein | C5715_13950 | Not Available | Negative | 2612926 - 2614344 | 50407.1 |
| acyl-coa synthetase fdra | C5715_13955 | Not Available | Negative | 2614344 - 2615891 | 55559.3 |
| duf2877 domain-containing protein | C5715_13960 | Not Available | Negative | 2615881 - 2616744 | 32116.4 |
| ankyrin repeat domain-containing protein | C5715_13965 | Not Available | Negative | 2616784 - 2617389 | 21720.4 |
| hypothetical protein | C5715_13970 | Not Available | Negative | 2617337 - 2617570 | 9006.03 |
| duf1097 domain-containing protein | C5715_13975 | Not Available | Positive | 2617647 - 2618144 | 17227.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





