Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | C5715_13420 | Not Available | Negative | 2509429 - 2510586 | 41270.9 |
| hypothetical protein | C5715_13425 | Not Available | Positive | 2510575 - 2510808 | 9656.76 |
| acref/envcd operon transcriptional regulator | C5715_13430 | Not Available | Positive | 2510985 - 2511629 | 24629.9 |
| duf2556 domain-containing protein | C5715_13435 | Not Available | Negative | 2511648 - 2511827 | 7203.93 |
| adenine-specific dna-methyltransferase | C5715_13440 | Not Available | Negative | 2511911 - 2512795 | 33376.2 |
| fis family transcriptional regulator | C5715_13445 | Not Available | Negative | 2512881 - 2513177 | 11240.6 |
| trna dihydrouridine synthase dusb | C5715_13450 | Not Available | Negative | 2513203 - 2514168 | 35868.2 |
| 50s ribosomal protein l11 methyltransferase | C5715_13455 | Not Available | Negative | 2514497 - 2515378 | 31878.8 |
| sodium/panthothenate symporter | C5715_13460 | Not Available | Negative | 2515390 - 2516841 | 51721.3 |
| hypothetical protein | C5715_13465 | Not Available | Negative | 2516831 - 2517073 | 9108.28 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





