Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannitol transporter subunit iia | C5715_13155 | Not Available | Negative | 2464441 - 2464884 | 16019.1 |
| hypothetical protein | C5715_13160 | Not Available | Positive | 2464985 - 2465182 | 7854.63 |
| prohibitin family protein | C5715_13165 | Not Available | Positive | 2465225 - 2466169 | 34574.8 |
| transketolase | C5715_13170 | Not Available | Negative | 2466214 - 2468205 | 72197.6 |
| metalloprotease | C5715_13175 | Not Available | Positive | 2468483 - 2469241 | 26830.9 |
| agmatinase | C5715_13180 | Not Available | Negative | 2469289 - 2470209 | 33558.9 |
| hypothetical protein | C5715_13185 | Not Available | Negative | 2470345 - 2471076 | 26367.7 |
| arginine decarboxylase | C5715_13190 | Not Available | Negative | 2471222 - 2473198 | 73904.7 |
| virulence promoting factor | C5715_13195 | Not Available | Negative | 2473207 - 2473338 | 4859.08 |
| hypothetical protein | C5715_13200 | Not Available | Positive | 2473474 - 2473689 | 8114.98 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





