Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | C5715_13055 | Not Available | Negative | 2444431 - 2445090 | 22861.8 |
| hypothetical protein | C5715_13060 | Not Available | Negative | 2445177 - 2445380 | 7634.34 |
| chromosome initiation inhibitor | C5715_13065 | Not Available | Positive | 2445473 - 2446366 | 33473.6 |
| methylmalonyl-coa mutase | C5715_13070 | Not Available | Positive | 2446570 - 2448714 | 77851.6 |
| methylmalonyl co-a mutase-associated gtpase meab | C5715_13075 | Not Available | Positive | 2448707 - 2449702 | 36679.1 |
| methylmalonyl-coa decarboxylase | C5715_13080 | Not Available | Positive | 2449713 - 2450498 | 29160.3 |
| succinate coa transferase | C5715_13085 | Not Available | Positive | 2450522 - 2452000 | 53872.6 |
| lysr family transcriptional regulator | C5715_13090 | Not Available | Negative | 2451997 - 2452893 | 34702.7 |
| oxidative stress defense protein | C5715_13095 | Not Available | Negative | 2453061 - 2453801 | 26636.7 |
| arginine exporter argo | C5715_13100 | Not Available | Negative | 2453894 - 2454529 | 23157.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





