Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | C5715_12900 | Not Available | Negative | 2415312 - 2415800 | 17514.3 |
| oxidoreductase (fe-s)-binding subunit | C5715_12905 | Not Available | Negative | 2415800 - 2417719 | 69117.9 |
| purine permease ygfu | C5715_12910 | Not Available | Positive | 2418022 - 2418108 | 3132.76 |
| uric acid transporter uact | C5715_12915 | Not Available | Positive | 2418155 - 2419603 | 51761.4 |
| hypothetical protein | C5715_12920 | Not Available | Positive | 2419605 - 2419730 | 4757.28 |
| isopentenyl-diphosphate delta-isomerase | C5715_12925 | Not Available | Positive | 2419853 - 2420401 | 20331.0 |
| lysine--trna ligase | C5715_12930 | Not Available | Negative | 2420444 - 2421961 | 57592.7 |
| peptide chain release factor 2 | C5715_12935 | Not Available | Negative | 2421971 - 2423069 | 41222.9 |
| single-stranded-dna-specific exonuclease recj | C5715_12940 | Not Available | Negative | 2423160 - 2424893 | 63393.6 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | C5715_12945 | Not Available | Negative | 2424899 - 2425609 | 25609.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





