Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | C5715_12795 | Not Available | Negative | 2386106 - 2386858 | 26481.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | C5715_12805 | Not Available | Positive | 2387274 - 2389571 | 82686.0 |
| xanthine dehydrogenase fad-binding subunit | C5715_12810 | Not Available | Positive | 2389582 - 2390460 | 31529.6 |
| xanthine dehydrogenase | C5715_12815 | Not Available | Positive | 2390457 - 2390936 | 16888.7 |
| sigma-54-dependent fis family transcriptional regulator | C5715_12820 | Not Available | Negative | 2390976 - 2392754 | 66111.0 |
| knotted carbamoyltransferase ygew | C5715_12825 | Not Available | Positive | 2393230 - 2394420 | 44189.9 |
| plp-dependent lyase/thiolase | C5715_12830 | Not Available | Positive | 2394478 - 2395674 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | C5715_12835 | Not Available | Positive | 2395732 - 2396943 | 44806.4 |
| dihydropyrimidinase | C5715_12840 | Not Available | Positive | 2396996 - 2398381 | 51032.1 |
| carbamate kinase-like protein yqea | C5715_12845 | Not Available | Positive | 2398429 - 2399361 | 33072.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





