Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | C5715_12240 | Not Available | Negative | 2304918 - 2305508 | 21091.4 |
| yran family protein | C5715_12245 | Not Available | Negative | 2305528 - 2305923 | 14784.4 |
| penicillin-binding protein activator | C5715_12250 | Not Available | Negative | 2305881 - 2307917 | 72801.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | C5715_12255 | Not Available | Positive | 2307982 - 2308845 | 31478.8 |
| galactosamine-6-phosphate isomerase | C5715_12260 | Not Available | Negative | 2308895 - 2309662 | 28425.4 |
| pts n-acetylgalactosamine transporter subunit iid | C5715_12265 | Not Available | Negative | 2309663 - 2310454 | 28976.1 |
| n-acetylgalactosamine permease iic component 1 | C5715_12270 | Not Available | Negative | 2310444 - 2311247 | 28646.5 |
| n-acetylgalactosamine-specific phosphotransferase enzyme iib component 1 | C5715_12275 | Not Available | Negative | 2311286 - 2311762 | 17609.3 |
| tagatose-1,6-bisphosphate aldolase | C5715_12280 | Not Available | Negative | 2311929 - 2312789 | 31295.4 |
| agas family sugar isomerase | C5715_12285 | Not Available | Negative | 2312802 - 2313956 | 41818.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





