Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | C5715_11740 | Not Available | Negative | 2212412 - 2213662 | 45772.4 |
| 23s rrna pseudouridine(2457) synthase rlue | C5715_11745 | Not Available | Positive | 2213834 - 2214487 | 24881.8 |
| nudix hydrolase | C5715_11750 | Not Available | Positive | 2214497 - 2214958 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | C5715_11755 | Not Available | Positive | 2215012 - 2216118 | 40975.7 |
| lysogenization protein hfld | C5715_11760 | Not Available | Positive | 2216154 - 2216795 | 22949.0 |
| adenylosuccinate lyase | C5715_11765 | Not Available | Positive | 2216799 - 2218169 | 51545.7 |
| two-component system response regulator phop | C5715_11770 | Not Available | Positive | 2218338 - 2219009 | 25536.7 |
| sensor protein phoq | C5715_11775 | Not Available | Positive | 2219009 - 2220469 | 55302.8 |
| cupin domain-containing protein | C5715_11780 | Not Available | Positive | 2220545 - 2221666 | 42625.2 |
| peptidase t | C5715_11785 | Not Available | Negative | 2221715 - 2222941 | 44911.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





