Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transporter a | C5715_11680 | Not Available | Positive | 2199570 - 2199797 | 8371.31 |
| fe(2+) transporter permease subunit feob | C5715_11685 | Not Available | Positive | 2199814 - 2200967 | 42215.5 |
| hemolysin-activating lysine-acyltransferase hlyc | C5715_11695 | Not Available | Positive | 2202061 - 2202573 | 19770.6 |
| rtx toxin hemolysin a | C5715_11700 | Not Available | Positive | 2202585 - 2205659 | 110163.0 |
| alpha-hemolysin translocation atp-binding protein hlyb | C5715_11705 | Not Available | Positive | 2205731 - 2207854 | 79663.6 |
| hlyd family type i secretion periplasmic adaptor subunit | C5715_11710 | Not Available | Positive | 2207873 - 2209309 | 54455.9 |
| conjugal transfer protein trar | C5715_11720 | Not Available | Positive | 2210371 - 2210503 | 4866.73 |
| duf4222 domain-containing protein | C5715_11725 | Not Available | Positive | 2210551 - 2210790 | 9539.55 |
| excisionase | C5715_11730 | Not Available | Positive | 2210930 - 2211166 | 8845.89 |
| integrase | C5715_11735 | Not Available | Positive | 2211156 - 2212298 | 43930.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





