Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein damx | C5715_11565 | Not Available | Negative | 2175441 - 2176727 | 46150.3 |
| 3-dehydroquinate synthase | C5715_11570 | Not Available | Negative | 2176819 - 2177907 | 38856.3 |
| shikimate kinase | C5715_11575 | Not Available | Negative | 2177964 - 2178485 | 19539.2 |
| dna transporter hofq | C5715_11580 | Not Available | Negative | 2178886 - 2180124 | 44723.9 |
| duf2531 domain-containing protein | C5715_11585 | Not Available | Negative | 2180036 - 2180440 | 15110.1 |
| dna utilization protein hofo | C5715_11590 | Not Available | Negative | 2180430 - 2180870 | 16790.0 |
| dna utilization protein hofn | C5715_11595 | Not Available | Negative | 2180854 - 2181393 | 20824.2 |
| carboxypeptidase/penicillin-binding protein 1a | C5715_11605 | Not Available | Positive | 2182292 - 2184844 | 93612.4 |
| adp compounds hydrolase nude | C5715_11610 | Not Available | Negative | 2185012 - 2185572 | 21138.4 |
| intracellular growth attenuator protein igaa | C5715_11615 | Not Available | Positive | 2185892 - 2188027 | 79443.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





